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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Malapachy_3076Tlg2-member of the syntaxin family of t-snares; Belongs to the syntaxin family. (342 aa)    
Predicted Functional Partners:
Malapachy_3818
Vesicle transport v-snare protein vti1.
   
 0.998
Malapachy_2903
Syntaxin family member tlg1.
    
 0.997
Malapachy_1526
Synaptobrevin.
    
 0.979
Malapachy_0560
Snare protein ykt6; Belongs to the synaptobrevin family.
    
 0.975
Malapachy_4181
Vesicular-fusion protein sec17.
    
 0.968
Malapachy_3213
Syntaxin-like protein.
    
 0.940
Malapachy_2742
Conserved oligomeric golgi complex subunit 8.
    
 0.879
Malapachy_1735
Retrograde transporter.
    
 0.864
Malapachy_0304
Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events.
    
 0.852
Malapachy_2483
Vps53_N domain-containing protein.
    
 0.827
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
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