STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Malapachy_0290Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). (451 aa)    
Predicted Functional Partners:
Malapachy_2223
60s ribosomal protein l5.
  
 
 0.969
Malapachy_0913
60s ribosomal protein l7.
  
 
 0.969
Malapachy_3836
60s ribosomal protein l35.
  
 
 0.967
Malapachy_1592
60s ribosomal protein l23; Belongs to the universal ribosomal protein uL23 family.
  
 
 0.949
Malapachy_0320
40s ribosomal protein s3.
  
 
 0.948
RPS0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
  
 
 0.919
Malapachy_2980
Sphingolipid delta(4)-desaturase; Delta(4)-fatty-acid desaturase which introduces a double bond at the 4-position in the long-chain base (LCB) of ceramides.
 
    
 0.902
Malapachy_3906
50s ribosomal protein l22; Belongs to the universal ribosomal protein uL22 family.
  
 
 0.889
Malapachy_1541
50s ribosomal protein l22; Belongs to the universal ribosomal protein uL22 family.
  
 
 0.889
Malapachy_3634
60s ribosomal protein l9.
  
 
 0.887
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
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