Malapachy_2754 protein (Malassezia pachydermatis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

Malapachy_2754

Zn2+-dependent endopeptidase. (1078 aa)

Predicted Functional Partners:

Malapachy_4202

0.603

Malapachy_1125

0.586

Malapachy_3244

0.586

Malapachy_1709

0.578

Malapachy_1582

0.573

Malapachy_0930

0.573

Malapachy_3623

0.559

Malapachy_2236

0.556

Malapachy_2532

0.550

Malapachy_1531

0.539

Your Current Organism:

Malassezia pachydermatis

NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Malapachy_0930	Malapachy_1125	A0A0M8MW98	A0A0M8MQ43	Vacuolar atp synthase proteolipid subunit; Belongs to the V-ATPase proteolipid subunit family.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.959
Malapachy_0930	Malapachy_1582	A0A0M8MW98	A0A0M8MK16	Vacuolar atp synthase proteolipid subunit; Belongs to the V-ATPase proteolipid subunit family.	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	0.999
Malapachy_0930	Malapachy_2754	A0A0M8MW98	A0A0M9VMP5	Vacuolar atp synthase proteolipid subunit; Belongs to the V-ATPase proteolipid subunit family.	Zn2+-dependent endopeptidase.	0.573
Malapachy_0930	Malapachy_3244	A0A0M8MW98	A0A0N0RSL3	Vacuolar atp synthase proteolipid subunit; Belongs to the V-ATPase proteolipid subunit family.	Rum1 protein.	0.959
Malapachy_0930	Malapachy_4202	A0A0M8MW98	A0A0N0RS57	Vacuolar atp synthase proteolipid subunit; Belongs to the V-ATPase proteolipid subunit family.	Mitochondrial matrix protein frataxin.	0.509
Malapachy_1125	Malapachy_0930	A0A0M8MQ43	A0A0M8MW98	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Vacuolar atp synthase proteolipid subunit; Belongs to the V-ATPase proteolipid subunit family.	0.959
Malapachy_1125	Malapachy_1531	A0A0M8MQ43	A0A0M8MIM2	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	T-complex protein zeta subunit (Tcp-1-zeta).	0.497
Malapachy_1125	Malapachy_1582	A0A0M8MQ43	A0A0M8MK16	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	0.974
Malapachy_1125	Malapachy_1709	A0A0M8MQ43	A0A0M8MNM1	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	T-complex protein 1 subunit delta.	0.497
Malapachy_1125	Malapachy_2236	A0A0M8MQ43	A0A0N0RSN8	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	T-complex-type molecular epsilon subunit.	0.507
Malapachy_1125	Malapachy_2532	A0A0M8MQ43	A0A0M8MVH7	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Heat shock protein 60; Belongs to the chaperonin (HSP60) family.	0.808
Malapachy_1125	Malapachy_2754	A0A0M8MQ43	A0A0M9VMP5	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Zn2+-dependent endopeptidase.	0.586
Malapachy_1125	Malapachy_3623	A0A0M8MQ43	A0A0M9VR41	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	T-complex protein beta subunit (Tcp-1-beta).	0.499
Malapachy_1125	Malapachy_4202	A0A0M8MQ43	A0A0N0RS57	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Mitochondrial matrix protein frataxin.	0.635
Malapachy_1531	Malapachy_1125	A0A0M8MIM2	A0A0M8MQ43	T-complex protein zeta subunit (Tcp-1-zeta).	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.497
Malapachy_1531	Malapachy_1709	A0A0M8MIM2	A0A0M8MNM1	T-complex protein zeta subunit (Tcp-1-zeta).	T-complex protein 1 subunit delta.	0.999
Malapachy_1531	Malapachy_2236	A0A0M8MIM2	A0A0N0RSN8	T-complex protein zeta subunit (Tcp-1-zeta).	T-complex-type molecular epsilon subunit.	0.999
Malapachy_1531	Malapachy_2532	A0A0M8MIM2	A0A0M8MVH7	T-complex protein zeta subunit (Tcp-1-zeta).	Heat shock protein 60; Belongs to the chaperonin (HSP60) family.	0.443
Malapachy_1531	Malapachy_2754	A0A0M8MIM2	A0A0M9VMP5	T-complex protein zeta subunit (Tcp-1-zeta).	Zn2+-dependent endopeptidase.	0.539
Malapachy_1531	Malapachy_3244	A0A0M8MIM2	A0A0N0RSL3	T-complex protein zeta subunit (Tcp-1-zeta).	Rum1 protein.	0.497