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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Malapachy_2881Camk camkl chk1 protein kinase. (552 aa)    
Predicted Functional Partners:
Malapachy_1591
Serine-protein kinase atr; Belongs to the PI3/PI4-kinase family.
    
 0.983
Malapachy_3150
Tyrosine phosphatase.
   
 0.971
Malapachy_2054
DNA helicase; Belongs to the MCM family.
   
 0.952
Malapachy_3569
Cdc45-like protein.
   
 0.951
Malapachy_3428
Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
   
 
 0.949
Malapachy_3204
DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.
   
 0.943
Malapachy_1092
Exo1-exonuclease which interacts with msh2p.
   
 0.912
Malapachy_1770
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
   
 0.875
Malapachy_0822
Wee protein kinase.
   
0.872
Malapachy_0700
Cell division control protein.
   
 0.872
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
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