Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Malapachy_1388Uncharacterized protein. (445 aa)    
Predicted Functional Partners:
Malapachy_1815
F-box-like wd repeat-containing protein tbl1xr1-like protein.
    
 0.809
Malapachy_1335
Transcription regulatory protein.
    
 0.781
Malapachy_1459
Transcription initiation factor tfiid subunit.
    
 0.780
Malapachy_2032
Uncharacterized protein.
    
 0.779
Malapachy_2364
Transcriptional adapter 2; Functions as component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA and ADA. SAGA is involved in RNA polymerase II-dependent transcriptional regulation.
    
 0.778
Malapachy_2870
SCA7 domain-containing protein.
    
 0.767
Malapachy_1596
Transcription initiation factor tfiid subunit 12.
    
 0.767
Malapachy_3332
Taf-domain-containing protein.
    
 0.767
Malapachy_2632
Tfiid and saga subunit.
    
 0.766
Malapachy_4204
Transcription initiation factor iid taf10 subunit.
    
 0.765
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
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