STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Malapachy_021450s ribosomal protein l19. (240 aa)    
Predicted Functional Partners:
Malapachy_0320
40s ribosomal protein s3.
   
 
 0.999
Malapachy_3836
60s ribosomal protein l35.
   
 
 0.999
Malapachy_4004
60s ribosomal protein mitochondrial.
   
 
 0.999
Malapachy_0542
Mrpl24-mitochondrial ribosomal large subunit.
  
 
 0.999
Malapachy_2628
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
  
 
 0.999
Malapachy_3644
30s ribosomal protein s16.
  
 
 0.999
Malapachy_1592
60s ribosomal protein l23; Belongs to the universal ribosomal protein uL23 family.
   
 
 0.999
Malapachy_1817
Ribosomal protein l17; Belongs to the bacterial ribosomal protein bL17 family.
  
 
 0.999
Malapachy_1886
Membrane protein.
  
 
 0.999
Malapachy_4213
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 0.999
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.