STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Malapachy_1186Spliceosome complex protein. (1002 aa)    
Predicted Functional Partners:
Malapachy_1418
Pre-mrna-splicing factor clf1.
   
0.999
Malapachy_2639
Uncharacterized protein.
    
 0.999
Malapachy_1473
Pre-mrna-processing protein 45.
   
 0.999
Malapachy_3651
Nuclear matrix protein.
   
 0.999
Malapachy_2779
Pre-mrna-splicing factor slt11.
   
 0.999
Malapachy_0803
Maternal g10 transcript.
    
 0.999
Malapachy_3654
Peptidyl-prolyl cis-trans isomerase e.
   
 0.999
Malapachy_2847
Uncharacterized protein.
    
 0.998
Malapachy_4132
Cef1-required during g2 m transition.
   
 
 0.992
Malapachy_1750
P-loop containing nucleoside triphosphate hydrolase protein.
   
 
 0.990
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
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