STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALA1Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family. (967 aa)    
Predicted Functional Partners:
Malapachy_2077
Tpr-like protein.
   
 0.910
Malapachy_2291
Anaphase-promoting complex component.
   
 0.909
Malapachy_3351
Negative regulator of mitosis.
    
 0.904
Malapachy_2337
Component of the anaphase promoting complex; Belongs to the cullin family.
    
 0.900
Malapachy_3139
Anaphase promoting complex subunit 10.
    
 0.900
Malapachy_0550
Anaphase promoting complex subunit.
    
 0.893
Malapachy_3303
Spindle assembly checkpoint protein.
    
 0.886
Malapachy_1138
Glycyl-trna synthetase.
  
 
 0.848
Malapachy_2076
40s ribosomal protein s18; Belongs to the universal ribosomal protein uS13 family.
    
 0.828
Malapachy_2074
Mitotic spindle checkpoint component mad2.
    
 0.818
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.