STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Malapachy_35072-hydroxyacid dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (373 aa)    
Predicted Functional Partners:
Malapachy_3900
Plp-dependent transferase.
  
 
 0.959
Malapachy_2702
Malate synthase; Belongs to the malate synthase family.
   
 
 0.952
Malapachy_1880
Isocitrate lyase.
  
 0.944
Malapachy_1984
Glycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
  
 
0.942
Malapachy_4063
Isocitrate lyase.
  
 
 0.940
Malapachy_3862
Uncharacterized protein.
    
 0.901
Malapachy_1541
50s ribosomal protein l22; Belongs to the universal ribosomal protein uL22 family.
 
      0.892
Malapachy_3786
Uncharacterized protein.
 
      0.888
Malapachy_4186
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.834
Malapachy_2039
D-amino-acid oxidase.
 
 
 
 0.832
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
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