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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Malapachy_3617Cystathionine beta-lyase. (841 aa)    
Predicted Functional Partners:
Malapachy_2488
Cysteine synthase.
 
 0.888
Malapachy_1415
Cobalamin-independent methionine synthase.
  
 
 0.867
Malapachy_0091
Tryptophan synthase.
  
 
 0.860
Malapachy_0730
Cysteine synthase.
 
 0.853
Malapachy_0291
Uncharacterized protein.
  
 
 0.797
Malapachy_1989
Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
  
 0.784
Malapachy_3280
Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
  
 0.784
Malapachy_0970
Adenosylhomocysteinase.
  
 0.761
Malapachy_2758
Plp-dependent transferase.
   
 
 0.760
Malapachy_2056
Glutamate-cysteine ligase catalytic subunit.
    
 0.739
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
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