STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Malapachy_3100Lhp1-rna binding protein. (426 aa)    
Predicted Functional Partners:
Malapachy_3383
Rpc40-40 kd subunit of dna-directed rna polymerases i and iii.
   
 0.769
Malapachy_1405
Eukaryotic translation initiation factor 4e class i; Belongs to the eukaryotic initiation factor 4E family.
   
 0.767
Malapachy_3110
80 kDa nuclear cap binding protein.
    
 0.755
Malapachy_3833
Rna-binding domain-containing protein.
   
 0.748
Malapachy_0717
Nuclear cap-binding protein subunit 2.
    
 0.741
Malapachy_1704
Dead-domain-containing protein; Belongs to the DEAD box helicase family.
   
 0.733
Malapachy_2202
Rna-binding domain-containing protein.
   
 0.733
Malapachy_0234
Rpc10-dna-directed rna polymerases iii kd subunit.
   
 0.725
Malapachy_0203
Serine arginine-rich splicing factor 4 isoform x1.
    
 0.725
Malapachy_2282
Rpb5 subunit of dna-directed rna polymerase.
   
 0.723
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
Server load: low (28%) [HD]