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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Malapachy_3576Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids. (330 aa)    
Predicted Functional Partners:
Malapachy_2021
zf-RING-like domain-containing protein.
   
 0.999
Malapachy_1905
E3 sumo-protein ligase nse2.
    
 0.999
Malapachy_2592
P-loop containing nucleoside triphosphate hydrolase protein.
   
 0.999
Malapachy_3039
P-loop containing nucleoside triphosphate hydrolase protein.
   
 0.999
Malapachy_0413
MAGE domain-containing protein.
   
 0.997
Malapachy_0311
Chalcone-flavanone isomerase.
   
 0.953
Malapachy_4258
Structural maintenance of chromosome protein 3.
   
 0.879
Malapachy_2713
Structural maintenance of chromosomes protein.
   
 0.865
Malapachy_1140
Structural maintenance of chromosomes protein.
   
 0.858
Malapachy_2517
Structural maintenance of chromosomes protein.
   
 0.842
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
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