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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Malapachy_3290Urease accessory protein. (284 aa)    
Predicted Functional Partners:
Malapachy_2891
Putative mitochondrial ribosomal protein.
   
 
 0.940
Malapachy_1702
Urease; In the C-terminal section; belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family.
 
  
 0.916
Malapachy_3584
MRP-L46 domain-containing protein.
   
 
 0.887
Malapachy_0620
Mrpl9-mitochondrial ribosomal large subunit; Belongs to the universal ribosomal protein uL3 family.
   
   0.882
Malapachy_0214
50s ribosomal protein l19.
   
 
 0.865
Malapachy_0124
Ribosomal protein l4.
   
 
 0.857
Malapachy_1665
Mrp-l47-domain-containing protein.
   
 
 0.855
Malapachy_3949
Mrpl16-mitochondrial ribosomal large subunit; Belongs to the universal ribosomal protein uL16 family.
   
 
 0.854
Malapachy_1604
Mitochondrial ribosomal protein s15.
   
   0.853
Malapachy_3906
50s ribosomal protein l22; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.848
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
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