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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Malapachy_4025Homoserine dehydrogenase; Belongs to the homoserine dehydrogenase family. (742 aa)    
Predicted Functional Partners:
Malapachy_0048
Proteasome subunit beta; Belongs to the peptidase T1B family.
   
 0.999
Malapachy_2474
Proteasome subunit beta.
   
0.999
Malapachy_3712
Proteasome subunit alpha type.
   
 0.999
Malapachy_2585
Proteasome subunit beta.
   
 0.999
Malapachy_2280
Proteasome subunit beta.
   
0.999
Malapachy_1437
Proteasome subunit beta.
   
 0.999
Malapachy_0145
Proteasome subunit alpha type.
   
 0.998
Malapachy_1575
Proteasome subunit alpha type.
   
0.998
Malapachy_3447
Proteasome subunit alpha type.
   
 0.998
Malapachy_3624
Proteasome subunit alpha type.
   
 0.998
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.