STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Malapachy_1230Vacuole protein. (900 aa)    
Predicted Functional Partners:
Malapachy_3142
Gtp-binding protein ypt1.
   
 
 0.753
Malapachy_0645
Uncharacterized protein; Belongs to the complex I LYR family.
    
 
 0.701
Malapachy_3720
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
   
   0.673
Malapachy_4038
Uncharacterized protein.
    
 
 0.548
Malapachy_0659
Glutamine synthetase; Belongs to the glutamine synthetase family.
   
 
 0.547
Malapachy_3798
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
  
 
 0.542
Malapachy_0848
Uncharacterized protein.
    
 
 0.504
Malapachy_3158
Uncharacterized protein.
    
 
 0.504
Malapachy_2743
Gdsl family lipase.
    
 
 0.504
Malapachy_0653
F-box tpr repeat containing protein pof3.
    
 
 0.504
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
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