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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Malapachy_4218Farnesyl-diphosphate farnesyltransferase. (552 aa)    
Predicted Functional Partners:
Malapachy_0981
Squalene monooxygenase.
  
 
 0.985
Malapachy_1146
Delta-sterol c-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Erg6/SMT family.
   
 0.984
Malapachy_1838
C-3 sterol dehydrogenase (C-4 sterol decarboxylase).
  
 
 0.980
Malapachy_2964
Erg25-c-4 methyl sterol oxidase; Belongs to the sterol desaturase family.
  
 0.979
Malapachy_0382
Uncharacterized protein.
   
 
 0.969
Malapachy_4067
Isoprenoid biosynthesis-related protein.
  
 0.968
Malapachy_4177
Geranylgeranyl diphosphate type iii; Belongs to the FPP/GGPP synthase family.
  
 0.968
Malapachy_1475
Coq1-hexaprenyl pyrophosphate synthetase; Belongs to the FPP/GGPP synthase family.
  
 0.963
Malapachy_2436
Erg28 protein.
   
 
 0.958
Malapachy_2533
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
 
 
 0.930
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
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