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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Malapachy_0723Mitochondrial 54s ribosomal protein 38 34; Belongs to the universal ribosomal protein uL14 family. (135 aa)    
Predicted Functional Partners:
Malapachy_3836
60s ribosomal protein l35.
  
 0.991
Malapachy_4004
60s ribosomal protein mitochondrial.
 
 
 0.991
Malapachy_2223
60s ribosomal protein l5.
  
 0.991
Malapachy_0913
60s ribosomal protein l7.
  
 0.991
Malapachy_1541
50s ribosomal protein l22; Belongs to the universal ribosomal protein uL22 family.
  
 0.990
Malapachy_3141
60s ribosomal protein l2.
  
 0.990
Malapachy_0533
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
  
 0.990
Malapachy_1592
60s ribosomal protein l23; Belongs to the universal ribosomal protein uL23 family.
  
 0.990
Malapachy_1649
60s ribosomal protein l34-b.
  
 0.989
Malapachy_1767
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
  
 0.989
Your Current Organism:
Malassezia pachydermatis
NCBI taxonomy Id: 77020
Other names: M. pachydermatis, Pityrosporum pachydermatis
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