STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1S7UH57Putative COBW domain-containing protein. (382 aa)    
Predicted Functional Partners:
A0A1S7UH50
Putative NOT2 NOT3 NOT5 family protein.
 
      0.899
A0A1W2TW41
Putative 54S ribosomal protein L24.
  
  
 0.691
A0A1S8A8R8
Putative 40S ribosomal protein S29.
  
 
 0.677
A0A1W2TGI5
Putative ribosomal protein S14p S29e.
  
 
 0.665
A0A1S7UJL8
Putative cue domain-containing protein.
 
      0.653
A0A1S8A9I8
Putative ribosomal protein L33.
  
  
 0.596
A0A1S7ULN0
Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
    
 
 0.580
A0A1W2TWD1
Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
    
 
 0.580
A0A1W2TES6
Putative elongation factor 2.
 
      0.479
A0A1W2TBW9
Histidine biosynthesis trifunctional protein.
   
 
 0.407
Your Current Organism:
Rosellinia necatrix
NCBI taxonomy Id: 77044
Other names: R. necatrix
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