STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1S7UHK2Putative duf300 domain-containing protein. (538 aa)    
Predicted Functional Partners:
A0A1W2TRP4
Putative SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family.
    
   0.560
A0A1S8A7I4
Putative nitrate assimilation regulatory protein nirA.
    
   0.558
A0A1S8A805
Putative nitrogen assimilation transcription factor nit-4.
    
   0.558
A0A1W2TVZ1
Autophagy-related protein.
    
   0.558
A0A1W2TDH6
Putative dpy-30 domain-containing protein.
    
   0.463
Your Current Organism:
Rosellinia necatrix
NCBI taxonomy Id: 77044
Other names: R. necatrix
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