STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1S7UI36Putative ribosome biogenesis protein MAK21. (1089 aa)    
Predicted Functional Partners:
A0A1W2TU92
Putative nucleolar complex protein 2 protein.
   
 
 0.997
A0A1W2TLW8
Putative rRNA biogenesis protein rrp5.
   
 
 0.995
A0A1W2THA6
Putative ATP-dependent RNA helicase dbp9.
   
 
 0.987
A0A1W2TWL3
Putative RNA recognition motif containing protein.
   
 
 0.986
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.980
A0A1S8A7R2
RNA helicase.
   
 
 0.978
A0A1W2TT85
Putative valyl-tRNA synthetase.
   
 
 0.978
A0A1W2TB18
Putative RNA recognition domain-containing protein.
   
 
 0.977
A0A1S7UL82
Putative ribosomal biogenesis protein Gar2.
   
 
 0.969
A0A1S7UJR4
Putative Brix domain protein.
   
   0.966
Your Current Organism:
Rosellinia necatrix
NCBI taxonomy Id: 77044
Other names: R. necatrix
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.