STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1S7UI75Putative DNA-directed RNA polymerase III subunit RPC8. (193 aa)    
Predicted Functional Partners:
A0A1W2TBI0
DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family.
   
 0.999
A0A1W2TK45
Putative DNA-directed RNA polymerase III subunit rpc9.
   
 0.999
A0A1S7UHH9
Putative DNA-directed RNA polymerases II 24 kDa polypeptide.
   
 0.998
A0A1S7UIU5
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.998
A0A1S7ULD1
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.998
A0A1S7ULU7
Putative DNA-directed RNA polymerases I II III subunit 10.
   
 0.998
A0A1W2TGU5
Putative DNA-directed RNA polymerases i and iii 40 kDa polypeptide.
   
 0.998
A0A1W2TGZ0
Putative DNA-directed RNA polymerase iii complex subunit rpc37 protein.
   
 0.998
A0A1W2TLK2
Putative DNA-directed RNA polymerase i and iii subunit rpac2.
   
 0.998
A0A1W2TN27
Putative DNA-directed RNA polymerase and III subunit RPABC2.
   
 0.998
Your Current Organism:
Rosellinia necatrix
NCBI taxonomy Id: 77044
Other names: R. necatrix
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