A0A1S7UI89 protein (Rosellinia necatrix) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A1S7UI89

Putative thioester reductase domain-containing protein. (1035 aa)

Predicted Functional Partners:

A0A1W2TW21

0.883

A0A1W2TBW9

0.814

A0A1W2TXJ5

0.801

A0A1W2TKE4

0.519

A0A1W2TS46

0.506

A0A1S7UJU2

0.483

A0A1S7ULQ8

0.483

A0A1S7UMT7

0.483

A0A1S8A7A8

0.483

A0A1S8A7B9

0.483

Your Current Organism:

Rosellinia necatrix

NCBI taxonomy Id: 77044
Other names: R. necatrix

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1S7UI89	A0A1S7UJU2	Putative thioester reductase domain-containing protein.	Putative peroxisomal-coenzyme A synthetase.	0.483
A0A1S7UI89	A0A1S7ULQ8	Putative thioester reductase domain-containing protein.	Putative AMP-binding enzyme.	0.483
A0A1S7UI89	A0A1S7UMT7	Putative thioester reductase domain-containing protein.	Putative AMP-binding enzyme.	0.483
A0A1S7UI89	A0A1S8A7A8	Putative thioester reductase domain-containing protein.	Putative peroxisomal-coenzyme a synthetase protein.	0.483
A0A1S7UI89	A0A1S8A7B9	Putative thioester reductase domain-containing protein.	Putative peroxisomal-coenzyme A synthetase.	0.483
A0A1S7UI89	A0A1W2TBW9	Putative thioester reductase domain-containing protein.	Histidine biosynthesis trifunctional protein.	0.814
A0A1S7UI89	A0A1W2TKE4	Putative thioester reductase domain-containing protein.	Putative glycerol:H+ symporter; Belongs to the membrane-bound acyltransferase family.	0.519
A0A1S7UI89	A0A1W2TS46	Putative thioester reductase domain-containing protein.	Putative pyoverdine biosynthesis.	0.506
A0A1S7UI89	A0A1W2TW21	Putative thioester reductase domain-containing protein.	Tryptophan synthase.	0.883
A0A1S7UI89	A0A1W2TXJ5	Putative thioester reductase domain-containing protein.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.801
A0A1S7UJU2	A0A1S7UI89	Putative peroxisomal-coenzyme A synthetase.	Putative thioester reductase domain-containing protein.	0.483
A0A1S7UJU2	A0A1S7UMT7	Putative peroxisomal-coenzyme A synthetase.	Putative AMP-binding enzyme.	0.528
A0A1S7UJU2	A0A1S8A7A8	Putative peroxisomal-coenzyme A synthetase.	Putative peroxisomal-coenzyme a synthetase protein.	0.900
A0A1S7UJU2	A0A1W2TXJ5	Putative peroxisomal-coenzyme A synthetase.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.790
A0A1S7ULQ8	A0A1S7UI89	Putative AMP-binding enzyme.	Putative thioester reductase domain-containing protein.	0.483
A0A1S7ULQ8	A0A1W2TXJ5	Putative AMP-binding enzyme.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.790
A0A1S7UMT7	A0A1S7UI89	Putative AMP-binding enzyme.	Putative thioester reductase domain-containing protein.	0.483
A0A1S7UMT7	A0A1S7UJU2	Putative AMP-binding enzyme.	Putative peroxisomal-coenzyme A synthetase.	0.528
A0A1S7UMT7	A0A1W2TXJ5	Putative AMP-binding enzyme.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.790
A0A1S8A7A8	A0A1S7UI89	Putative peroxisomal-coenzyme a synthetase protein.	Putative thioester reductase domain-containing protein.	0.483