Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A1S7UID0Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting. (886 aa)    
Predicted Functional Partners:
A0A1W2TPZ7
Putative vacuolar protein sorting-associated protein 26.
   
 0.999
A0A1W2TR81
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
   
 0.998
A0A1W2TNJ4
Putative sorting nexin-3.
   
 0.995
A0A1S7UHI2
Vacuolar protein sorting-associated protein 17; Plays a role in vesicular protein sorting. Belongs to the VPS17 family.
   
 0.992
A0A1W2TVH3
Putative vacuolar protein sorting-associated protein VPS5.
   
 0.985
A0A1S7UMJ1
Putative sorting nexin-4.
   
 
 0.964
A0A1W2TKN0
Putative sorting nexin mvp-1.
   
 
 0.960
A0A1W2TJU4
Putative WD repeat domain-containing protein.
   
 
 0.952
A0A1W2TQ13
Sortilin; Functions as a sorting receptor in the Golgi compartment required for the intracellular sorting and delivery of soluble vacuolar proteins, like carboxypeptidase Y (CPY) and proteinase A.
    
 
 0.945
A0A1W2TLD4
Putative Ras-like protein Rab7.
    
 
 0.942
Your Current Organism:
Rosellinia necatrix
NCBI taxonomy Id: 77044
Other names: R. necatrix
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