STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1S7UID7Putative HET domain-containing protein. (576 aa)    
Predicted Functional Partners:
A0A1S7UHM2
3-isopropylmalate dehydratase; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
  
 0.902
A0A1S7UKB5
Putative acetolactate synthase small subunit.
  
 0.864
A0A1W2TDF8
Acetolactate synthase.
  
 0.815
A0A1W2TBW6
Threonine dehydratase.
   
 0.746
A0A1W2TMI0
Putative 2-isopropylmalate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family.
  
 0.732
A0A1S8A6M5
Putative threonine dehydratase.
   
  0.730
A0A1W2TSK3
Putative homocitrate synthase.
  
 0.631
A0A1W2TUC3
Putative 2-oxoglutarate dehydrogenase E1 component.
   
 0.620
A0A1S7UK45
Putative phosphoglycerate mutase family.
   
 0.606
A0A1S8A5A1
Putative subunit of the RNA polymerase ii mediator complex protein.
   
 0.606
Your Current Organism:
Rosellinia necatrix
NCBI taxonomy Id: 77044
Other names: R. necatrix
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