STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1S7UII7Putative allergen Asp F7. (284 aa)    
Predicted Functional Partners:
A0A1W2TLB0
Putative microfibril-associated protein.
   
 0.793
A0A1W2TP55
Putative prp38 family protein.
   
 0.778
A0A1W2TGY6
Putative pwi domain mRNA processing protein.
   
 0.759
A0A1W2TDW0
Putative pre-mRNA-processing ATP-dependent RNA helicase PRP5.
   
  0.751
A0A1W2TWT6
Putative ubiquitin-like protein.
    
  0.655
A0A1S7UKF8
Putative pre-mRNA-splicing factor cef-1.
   
  0.636
A0A1S7UIT0
Putative cwf18 pre-mRNA splicing factor.
    
  0.618
A0A1W2TKV1
Putative cell cycle control protein.
    
  0.618
A0A1W2TUX0
Putative cell cycle control protein.
    
  0.618
A0A1W2TF24
Putative pre-mRNA splicing factor slt11.
    
  0.616
Your Current Organism:
Rosellinia necatrix
NCBI taxonomy Id: 77044
Other names: R. necatrix
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.