STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1S7UJG6Putative zinc knuckle transcription factor protein. (517 aa)    
Predicted Functional Partners:
A0A1S7UII2
Putative PRP1 splicing factor.
    
 0.875
A0A1W2TKD2
Putative elongation factor 2.
   
 0.857
A0A1S7UKF8
Putative pre-mRNA-splicing factor cef-1.
    
 0.801
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.756
A0A1S7UJH5
ATP synthase subunit gamma.
   
 
 0.724
A0A1W2TK21
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 
 0.724
A0A1W2TV01
Putative prion formation protein 1.
   
 
 0.723
A0A1W2TL49
Putative ATP synthase subunit 5.
   
 
 0.714
A0A1W2TU34
ATP synthase subunit d, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the cent [...]
   
   0.711
A0A1W2TPP6
Putative elongation factor 3.
   
 
 0.689
Your Current Organism:
Rosellinia necatrix
NCBI taxonomy Id: 77044
Other names: R. necatrix
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.