STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1S7UL29Uncharacterized protein. (494 aa)    
Predicted Functional Partners:
A0A1S7UIE5
Putative homeobox protein.
    
 
 0.664
A0A1S7UIK2
Uncharacterized protein.
    
 0.551
A0A1S7UMT8
Uncharacterized protein.
    
 0.551
A0A1W2TBJ5
Putative histone deacetylase 1 2.
    
 0.528
A0A1W2TGP7
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.528
A0A1W2TVT3
Putative MADS-box transcription other eukaryote.
   
 
 0.508
A0A1W2TD94
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
    
 
 0.499
A0A1S8A6J5
Putative histone deacetylase HOS3.
    
  0.460
A0A1W2TUD9
Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events.
    
  0.460
A0A1S7UMD8
E3 ubiquitin-protein ligase.
    
 0.439
Your Current Organism:
Rosellinia necatrix
NCBI taxonomy Id: 77044
Other names: R. necatrix
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