STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1S7ULJ7Uncharacterized protein. (531 aa)    
Predicted Functional Partners:
A0A1W2TDM0
Putative crossover junction endonuclease MUS81.
    
 0.594
A0A1S7ULJ0
Putative DNA polymerase delta subunit 2.
    
 0.585
A0A1S7UM38
DNA polymerase.
   
 0.583
A0A1S8A6P5
Putative SMN family protein Smn1.
    
 0.578
A0A1S8AB21
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
  0.542
A0A1W2TVR1
Putative histone acetyltransferase type B subunit 2.
    
  0.532
A0A1W2TTH1
Putative DNA excision repair protein ERCC-4.
    
 0.530
A0A1S7ULT1
Small nuclear ribonucleoprotein G.
    
  0.516
A0A1W2TSB6
Small nuclear ribonucleoprotein Sm D2.
    
 0.495
A0A1S7UNL5
Small nuclear ribonucleoprotein Sm D3.
    
  0.488
Your Current Organism:
Rosellinia necatrix
NCBI taxonomy Id: 77044
Other names: R. necatrix
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.