STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1S7UM20Putative importin-beta domain-containing protein. (1037 aa)    
Predicted Functional Partners:
A0A1S7UJM7
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
 
 0.685
A0A1W2TSZ0
Putative alcohol dehydrogenase.
 
 
    0.561
A0A1W2TD73
Putative mRNA export factor mex67.
    
 
 0.557
A0A1W2TFD6
Putative karyopherin kap123 protein.
   
  
 0.525
A0A1W2TEN3
Putative ARM repeat-containing protein.
      
 0.523
A0A1W2TF00
Putative importin subunit beta-1 protein.
      
 0.522
A0A1W2TUP5
Putative importin-beta domain-containing protein.
      
 0.522
A0A1W2TNU0
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
    
 
 0.490
A0A1S7UQ63
Putative importin subunit beta-3.
   
  
 0.465
A0A1W2TTN2
Putative exportin 1-like protein.
      
 0.461
Your Current Organism:
Rosellinia necatrix
NCBI taxonomy Id: 77044
Other names: R. necatrix
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