STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1S7UM83Putative kelch repeats protein. (691 aa)    
Predicted Functional Partners:
A0A1S7UKJ3
Putative WLM domain-containing protein.
 
      0.779
A0A1S7UM73
Putative RNA cap guanine-N2 methyltransferase.
 
 
    0.649
A0A1S7UI36
Putative ribosome biogenesis protein MAK21.
   
    0.543
A0A1W2TVE7
Putative U3 small nucleolar RNA-associated protein 6.
   
    0.543
A0A1W2TWL3
Putative RNA recognition motif containing protein.
   
    0.531
A0A1W2TT85
Putative valyl-tRNA synthetase.
   
    0.521
A0A1S7UKB2
Putative pre-rRNA-processing protein PNO1.
    
   0.502
A0A1W2TX37
Putative ribosome biogenesis protein bms1 protein.
   
    0.499
A0A1W2THI1
Putative periodic tryptophan protein 2.
   
    0.472
A0A1W2TT69
Protein MAK16; Belongs to the MAK16 family.
   
    0.459
Your Current Organism:
Rosellinia necatrix
NCBI taxonomy Id: 77044
Other names: R. necatrix
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.