STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1S7UML9Putative snf2 family domain-containing protein. (1614 aa)    
Predicted Functional Partners:
A0A1W2TVR1
Putative histone acetyltransferase type B subunit 2.
   
 0.989
A0A1W2TBJ5
Putative histone deacetylase 1 2.
   
 0.964
A0A1W2TGP7
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.964
A0A1W2TPI0
Putative methyl-binding domain-containing protein 4.
    
 0.960
A0A1S7UJH7
Putative flavin containing amine oxidoreductase.
   
 0.891
A0A1W2TJH1
Putative heterochromatin protein one protein.
    
 0.889
A0A1W2TSE0
Putative chromo domain-containing protein.
    
 0.851
A0A1W2TW27
Putative chromo domain-containing protein.
    
 0.851
A0A1W2TNR4
Putative Sin3 associated polypeptide p18.
    
 0.846
A0A1W2TRB5
Putative mortality factor 4-like protein 1.
    
 0.789
Your Current Organism:
Rosellinia necatrix
NCBI taxonomy Id: 77044
Other names: R. necatrix
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.