STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1S8A6S1Putative l-fucose permease. (118 aa)    
Predicted Functional Partners:
A0A1S7UJF1
Ubiquitin carboxyl-terminal hydrolase.
    
 0.715
A0A1W2TF87
Putative ribosomal protein S16.
    
 
 0.715
A0A1W2THN6
Putative 40S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
   
 
 0.708
A0A1S7UK63
Putative AT hook domain-containing protein.
    
 0.701
A0A1S7UHG1
Putative 50S ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.
    
 
 0.699
A0A1W2TL24
Putative 50S ribosomal protein L3.
   
 
 0.699
A0A1S7UK05
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
  0.690
A0A1S7UKK7
Putative proliferating cell nuclear antigen protein.
   
  0.690
A0A1W2TGI5
Putative ribosomal protein S14p S29e.
    
 
 0.687
A0A1W2TBX5
Putative 40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.682
Your Current Organism:
Rosellinia necatrix
NCBI taxonomy Id: 77044
Other names: R. necatrix
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