STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1S8A729Putative carbohydrate esterase family 15 protein. (129 aa)    
Predicted Functional Partners:
A0A1W2TVR1
Putative histone acetyltransferase type B subunit 2.
    
 0.685
A0A1S7UJ07
Putative ribosomal protein S18.
    
   0.447
A0A1W2TC90
Putative metal homeostasis factor atx1.
    
   0.438
A0A1S7UNY6
Putative mitochondrial inner membrane aaa protease.
    
 
 0.414
A0A1W2TKL9
Putative ribosomal protein L15.
    
 
 0.414
A0A1W2TL24
Putative 50S ribosomal protein L3.
    
 
 0.414
A0A1W2TGI5
Putative ribosomal protein S14p S29e.
    
 
 0.411
Your Current Organism:
Rosellinia necatrix
NCBI taxonomy Id: 77044
Other names: R. necatrix
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.