STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1S8A9D4Putative DNA repair protein rad5. (173 aa)    
Predicted Functional Partners:
A0A1S8A4U5
Putative RAD5-like protein.
 
     0.950
A0A1W2TNF1
Putative alpha--mannosyltransferase.
 
      0.899
A0A1W2TTK0
Putative E3 ubiquitin-protein ligase RAD18.
   
 0.725
A0A1W2TWA4
Putative ubiquitin-conjugating enzyme E2 35; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.714
A0A1W2TFI4
Putative ubiquitin-conjugating enzyme e2.
    
 0.689
A0A1W2TFV0
Putative start control protein cdc10 protein.
    
 0.672
A0A1W2TCJ0
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 0.663
A0A1S7UMX1
Putative ank-repeat protein mbp1.
    
 0.654
A0A1W2TPM5
Putative actin-related ARP5 class; Belongs to the actin family.
    
 0.646
A0A1S7UNL3
Putative exo1 protein.
   
 0.634
Your Current Organism:
Rosellinia necatrix
NCBI taxonomy Id: 77044
Other names: R. necatrix
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