STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1S8A9N7Putative MYND finger family protein. (111 aa)    
Predicted Functional Partners:
A0A1W2TGP8
Putative WD domain-containing protein.
    
 0.656
A0A1S7UJW7
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.649
A0A1S7UHU6
Putative SPRY domain-containing protein.
    
 0.625
A0A1W2TBP4
Putative Set1 complex component swd1.
    
 0.625
A0A1W2TVR1
Putative histone acetyltransferase type B subunit 2.
    
 0.611
A0A1W2TK65
Histone H2A; Belongs to the histone H2A family.
    
 0.595
A0A1W2TN71
Histone H2B; Belongs to the histone H2B family.
    
 0.584
A0A1W2TSZ4
Putative ebs-bah-phd domain-containing protein.
    
 
 0.577
A0A1W2TLK4
Histone-lysine N-methyltransferase, H3 lysine-79 specific; Histone methyltransferase that specifically methylates histone H3 to form H3K79me. This methylation is required for telomere silencing and for the pachytene checkpoint during the meiotic cell cycle by allowing the recruitment of RAD9 to double strand breaks. Nucleosomes are preferred as substrate compared to free histones.
    
 0.575
A0A1W2TK74
Uncharacterized protein.
   
 0.542
Your Current Organism:
Rosellinia necatrix
NCBI taxonomy Id: 77044
Other names: R. necatrix
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.