STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1S8AA27Putative dis1-suppressing protein kinase dsk1. (71 aa)    
Predicted Functional Partners:
A0A1S8A874
Putative pre-mRNA splicing factor.
    
 0.821
A0A1S8A951
Putative questionable protein.
    
 0.821
A0A1S7UKF8
Putative pre-mRNA-splicing factor cef-1.
    
   0.807
A0A1W2TDI9
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
    
 
 0.756
A0A1W2TC73
Putative RNA splicing factor Pad-1.
    
 
 0.617
A0A1W2TNU2
Putative U1 small nuclear ribonucleoprotein.
    
 0.542
A0A1S7URX3
Putative pre-mRNA-splicing factor srp1.
    
 0.525
A0A1S7UKZ2
Putative C6 zinc finger domain-containing protein.
    
 0.511
A0A1W2TWZ7
Putative branchpoint-bridging protein.
    
 
 0.471
A0A1S7ULT7
Putative RNA recognition domain-containing protein.
    
 0.453
Your Current Organism:
Rosellinia necatrix
NCBI taxonomy Id: 77044
Other names: R. necatrix
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.