STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1S8AA37Putative centromere microtubule-binding protein cbf5. (72 aa)    
Predicted Functional Partners:
A0A1W2TD21
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
  
 0.995
A0A1W2TVH7
Putative nucleolar protein 56.
   
 
 0.983
A0A1S8AA30
Putative H ACA ribonucleoprotein complex subunit 3.
   
 0.981
A0A1W2TWR3
Putative nucleolar protein 58.
  
 
 0.976
A0A1W2TDD6
Putative WD repeat-containing protein 79.
    
 0.975
A0A1S8A6J9
Uncharacterized protein.
   
 0.962
A0A1W2TRR9
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
  
 0.962
A0A1S8A9I6
Uncharacterized protein.
   
 
 0.961
A0A1S8A9N0
Putative rRNA methyltransferase NOP1.
   
 
 0.961
A0A1S8A7R2
RNA helicase.
  
 
 0.954
Your Current Organism:
Rosellinia necatrix
NCBI taxonomy Id: 77044
Other names: R. necatrix
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