STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1W2TBI7Putative zinc fyve domain-containing protein. (391 aa)    
Predicted Functional Partners:
A0A1S7UJ59
Putative longin-like protein.
   
 0.963
A0A1S8AAI3
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
 0.961
A0A1S7UJ48
Trafficking protein particle complex subunit BET3.
   
 0.958
A0A1W2TMU6
Putative trafficking protein particle complex subunit 2.
   
 0.958
A0A1W2TLA9
Trafficking protein particle complex subunit; Plays a key role in the late stages of endoplasmic reticulum to Golgi traffic.
    
 0.957
A0A1W2TLM3
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
 0.957
A0A1W2TTI4
Putative trapp complex protein trs85.
   
 0.957
A0A1W2TTZ1
Putative cis-Golgi transport protein particle complex subunit.
    
 0.949
A0A1W2TVQ2
Putative hypercellular protein.
   
 0.947
A0A1W2TJE7
Uncharacterized protein.
   
 0.942
Your Current Organism:
Rosellinia necatrix
NCBI taxonomy Id: 77044
Other names: R. necatrix
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