STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1W2TC81Putative endoribonuclease YSH1. (839 aa)    
Predicted Functional Partners:
A0A1W2TAV5
Putative mRNA cleavage and polyadenylation specificity factor complex subunit.
   
 0.999
A0A1W2THY2
Putative polyadenylation factor subunit 2.
   
 0.999
A0A1W2TQU0
Cleavage and polyadenylation specificity factor subunit 2.
   
0.999
A0A1S7UK11
Putative yt521-b-like splicing.
   
 0.998
A0A1S7UM80
Putative mRNA 3-end-processing protein yth-1.
   
 0.998
A0A1W2TBQ3
Putative CPSF A subunit region.
   
 0.998
A0A1W2TTF6
Putative pre-mRNA polyadenylation factor.
    
 0.997
A0A1W2TW12
Putative retinoblastoma-binding protein.
    
 0.997
A0A1W2TI37
Putative wd repeat containing protein 82 protein.
   
 0.995
A0A1S7UKK6
Putative mRNA cleavage factor complex component pcf11.
    
 0.994
Your Current Organism:
Rosellinia necatrix
NCBI taxonomy Id: 77044
Other names: R. necatrix
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.