STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1W2TCP3Putative helicase associated domain-containing protein. (1493 aa)    
Predicted Functional Partners:
A0A1W2TX57
Putative AP-2 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.
    
 0.946
A0A1W2TB79
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 0.869
A0A1W2TFG9
Putative small nucleolar ribonucleoprotein complex subunit utp14 protein.
   
 0.842
A0A1W2TE69
Putative nucleolar complex protein 4.
   
  0.823
A0A1W2TJB8
Putative 40S ribosomal protein S24.
 
  
  0.821
A0A1W2TLW8
Putative rRNA biogenesis protein rrp5.
  
 0.820
A0A1S7UM91
Putative pre-mRNA-processing factor 17.
    
 0.807
A0A1S7UJX3
Putative u3 small nucleolar RNA-associated protein.
   
 0.780
A0A1W2TV62
Putative pre-mRNA-splicing factor SLU7.
    
 0.779
A0A1W2TI27
Putative sas10 utp3 family protein.
   
 0.778
Your Current Organism:
Rosellinia necatrix
NCBI taxonomy Id: 77044
Other names: R. necatrix
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