STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1W2TCQ3Putative mitochondrial large ribosomal subunit; Belongs to the universal ribosomal protein uL22 family. (336 aa)    
Predicted Functional Partners:
A0A1S7UJE1
Putative ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
  
 
 0.998
A0A1W2TF87
Putative ribosomal protein S16.
   
 
 0.998
A0A1W2THN6
Putative 40S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.998
A0A1W2TL24
Putative 50S ribosomal protein L3.
  
 0.998
A0A1W2TUW0
Putative 50S ribosomal protein L2.
  
 0.998
A0A1W2TW76
Putative 54S ribosomal protein L6; Belongs to the universal ribosomal protein uL6 family.
  
 0.998
A0A1S7UME0
Putative 60S ribosomal protein L5.
  
 0.997
A0A1S8A9I8
Putative ribosomal protein L33.
  
 
 0.997
A0A1W2TGI5
Putative ribosomal protein S14p S29e.
  
 
 0.997
A0A1W2TH06
Putative 37S ribosomal protein s12; Belongs to the universal ribosomal protein uS12 family.
  
 
 0.997
Your Current Organism:
Rosellinia necatrix
NCBI taxonomy Id: 77044
Other names: R. necatrix
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