STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1W2TDP3Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1681 aa)    
Predicted Functional Partners:
A0A1W2TQQ0
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
   
 0.999
A0A1S7UKY6
Putative UBA TS-N domain-containing protein.
   
 0.997
A0A1W2TQS6
AP-1 complex subunit gamma.
   
 0.990
A0A1W2TG75
Putative enth domain-containing protein.
    
 0.988
A0A1W2TV25
Putative cytoskeleton assembly control protein sla2 protein.
    
 0.984
A0A1S7UH15
Putative dual specificity phosphatase.
    
 0.966
A0A1W2TV69
Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane.
    
 0.964
A0A1S7UKI3
Putative UBA TS-N domain-containing protein.
   
 0.962
A0A1W2TX57
Putative AP-2 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.
   
 0.962
A0A1W2TBJ8
Putative Golgi to endosome transport protein.
    
 0.961
Your Current Organism:
Rosellinia necatrix
NCBI taxonomy Id: 77044
Other names: R. necatrix
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