STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1W2TE34Putative coxI translation protein CYA5. (1098 aa)    
Predicted Functional Partners:
A0A1S7ULH8
Spindle pole body component.
    
 0.790
A0A1S7UI63
Spindle pole body component.
    
 0.700
A0A1W2TEY1
Putative propionyl-carboxylase beta chain.
   
 0.681
A0A1W2TSN8
Putative propionyl-carboxylase beta mitochondrial.
   
 0.681
A0A1W2TEA6
Putative CDC45-like protein.
   
 
  0.666
A0A1S7UMP2
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
   
 0.653
A0A1W2TRW4
Putative g1 s regulator protein.
   
 
  0.648
A0A1S7UJW7
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.631
A0A1W2TKJ7
Putative set domain-containing protein.
    
 0.625
A0A1W2TVP9
Nucleoside diphosphate kinase.
    
 0.625
Your Current Organism:
Rosellinia necatrix
NCBI taxonomy Id: 77044
Other names: R. necatrix
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.