STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1W2TEU9Putative cell wall glycosyl hydrolase. (376 aa)    
Predicted Functional Partners:
A0A1W2TL21
Putative six-hairpin glycosidase-like protein.
 
      0.676
A0A1S7UIL7
Beta-galactosidase.
  
 
 0.550
A0A1S8ABF1
Beta-galactosidase.
  
 
 0.550
A0A1W2TIU2
Putative beta-galactosidase B.
  
 
 0.550
A0A1S7UNJ1
Putative aldose 1-epimerase.
  
 
  0.547
A0A1S8AAF5
Putative arylsulfatase.
    
  0.500
A0A1S8AB69
Putative lysine methyltransferase.
    
  0.500
A0A1S8ACE3
Putative ankyrin repeat protein.
    
  0.500
A0A1W2TG34
Putative NADH-ubiquinone oxidoreductase kDa subunit.
    
  0.500
A0A1W2TIY1
Putative choline-sulfatase.
    
  0.500
Your Current Organism:
Rosellinia necatrix
NCBI taxonomy Id: 77044
Other names: R. necatrix
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.