STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1W2TG10Putative Zn-finger in ubiquitin-hydrolase. (723 aa)    
Predicted Functional Partners:
A0A1W2TVE1
Putative ubiquitin-40S ribosomal protein S27a.
 
  
  0.938
A0A1W2TFZ8
Putative polyubiquitin.
 
  
 0.931
A0A1S7UIX8
Putative ubiquitin-60S ribosomal protein L40.
 
   
  0.916
A0A1W2TJK3
Putative transcription factor bZIP.
    
  0.741
A0A1S8A9I9
Putative integral membrane protein.
    
 0.733
A0A1W2TCF0
Putative ubiquitin supergroup protein.
    
 0.733
A0A1W2TD24
Putative an1-type zinc finger protein.
    
 0.733
A0A1S7UJG8
Putative NEDD8.
    
 0.663
A0A1S7UMC3
Putative SAM domain-containing protein.
    
  0.655
A0A1S7US60
Uncharacterized protein.
    
  0.655
Your Current Organism:
Rosellinia necatrix
NCBI taxonomy Id: 77044
Other names: R. necatrix
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.