STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1W2TH04Putative arrestin protein. (489 aa)    
Predicted Functional Partners:
A0A1S7UME5
Putative bZIP transcription factor.
   
 0.742
A0A1W2TFF0
Putative bZIP transcription factor.
   
 0.742
A0A1W2TL28
Putative kinetochore protein spc25.
    
 0.722
A0A1W2TUK9
Putative Nuf2 family protein.
    
 0.712
A0A1W2TRV5
Putative kinetochore protein NDC80.
    
  0.678
A0A1S7UMM7
Putative traf-like signal protein.
    
 0.677
A0A1S7UJW7
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
  0.624
A0A1W2TBJ5
Putative histone deacetylase 1 2.
    
 0.610
A0A1W2TGP7
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.610
A0A1W2TAJ5
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
    
 0.596
Your Current Organism:
Rosellinia necatrix
NCBI taxonomy Id: 77044
Other names: R. necatrix
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.