STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1W2THA2Putative TLC domain-containing protein. (409 aa)    
Predicted Functional Partners:
A0A1S7UJC1
Putative GPI biosynthesis protein family Pig-F.
     
 0.803
A0A1W2TI28
Putative short-chain dehydrogenase.
     
 0.803
A0A1W2TSM3
Putative 3-ketodihydrosphingosine reductase tsc10.
     
 0.803
A0A1W2TWS2
Putative PAP2 superfamily protein.
    
 0.735
A0A1W2TEK8
Putative fatty acid hydroxylase superfamily protein; Belongs to the sterol desaturase family.
   
 0.726
A0A1S7UJ62
Sphingolipid delta(4)-desaturase; Delta(4)-fatty-acid desaturase which introduces a double bond at the 4-position in the long-chain base (LCB) of ceramides.
    
 0.707
A0A1W2TPK7
Putative alkaline phytoceramidase.
    
 0.681
A0A1W2TS15
Putative alkaline ceramidase family protein.
    
 0.681
A0A1W2TD92
Putative inositol phosphosphingolipids phospholipase C.
     
 0.674
A0A1W2TV89
Putative diacylglycerol kinase catalytic domain-containing protein.
     
 0.674
Your Current Organism:
Rosellinia necatrix
NCBI taxonomy Id: 77044
Other names: R. necatrix
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.