STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1W2THF5Putative short chain dehydrogenase. (312 aa)    
Predicted Functional Partners:
A0A1S7UKQ5
Putative peroxisomal targeting signal receptor.
   
 0.985
A0A1W2TG16
Putative peroxin 14.
    
 0.966
A0A1S7ULX3
Putative peroxisomal membrane protein.
   
 
 0.960
A0A1W2TGM7
Putative pex2 pex12 amino terminal region protein.
   
 0.960
A0A1S8A8K6
Putative at hook domain-containing protein family protein.
    
 0.959
A0A1W2TCA5
Putative nonspecific lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.927
A0A1S7UHZ6
Putative acyl-dehydrogenase oxidase.
  
 0.920
A0A1W2TJU9
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.920
A0A1S7UJ61
Putative malonyl-acyl carrier protein transacylase.
  
 0.911
A0A1W2THG3
Putative 2Fe-2S iron-sulfur cluster binding domain-containing protein.
  
 0.908
Your Current Organism:
Rosellinia necatrix
NCBI taxonomy Id: 77044
Other names: R. necatrix
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.