STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1W2TIQ8Putative ankyrin repeat and zinc finger domain-containing protein. (672 aa)    
Predicted Functional Partners:
A0A1W2TH86
Putative ATPase.
    
 
 0.861
A0A1W2TLZ4
Putative cell division control protein Cdc48; Belongs to the AAA ATPase family.
    
 
 0.861
A0A1W2TFS1
Putative AAA family ATPase.
   
 
 0.858
TIF6
Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family.
    
   0.838
A0A1W2TF86
Putative carbamoyl-phosphate synthase subunit L.
 
 
    0.783
A0A1W2TIR7
Putative duf814 domain-containing protein.
   
 
 0.669
A0A1S7UK51
Putative ubiquitin conjugation factor E4 B.
    
 
 0.652
A0A1W2TI75
Putative 60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
    
 
 0.615
A0A1S8A5I8
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
    
 
 0.603
A0A1S7UIJ0
Putative 60S ribosomal protein L30.
    
   0.601
Your Current Organism:
Rosellinia necatrix
NCBI taxonomy Id: 77044
Other names: R. necatrix
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