STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1W2TJ07Putative cytidine deaminase. (192 aa)    
Predicted Functional Partners:
A0A1W2TNY0
Putative cytidine deaminase-like protein.
    
 0.794
A0A1S8A5X7
Putative phosphopantothenoylcysteine decarboxylase.
  
 
 0.679
A0A1W2TVW5
Putative thymidylate synthase.
  
 
 0.664
A0A1W2TFG8
S-methyl-5'-thioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates.
    
 0.626
A0A1W2TIF4
Putative xanthine dehydrogenase.
    
 0.609
A0A1S7UIB5
Putative inosine-uridine preferring nucleoside hydrolase.
    
 0.586
A0A1W2TD83
Putative DNA glycosylase.
    
 0.586
A0A1W2TWX3
Putative thymidylate kinase.
    
 0.578
A0A1W2TWZ3
Putative thymidylate kinase protein.
    
 0.578
A0A1W2TG84
Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
   
 
 0.540
Your Current Organism:
Rosellinia necatrix
NCBI taxonomy Id: 77044
Other names: R. necatrix
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